Python Module Index

m
 
m
matchms
    matchms.calculate_scores
    matchms.constants
    matchms.exporting
    matchms.exporting.save_as_json
    matchms.exporting.save_as_mgf
    matchms.exporting.save_as_msp
    matchms.filtering
    matchms.filtering.add_compound_name
    matchms.filtering.add_fingerprint
    matchms.filtering.add_losses
    matchms.filtering.add_parent_mass
    matchms.filtering.add_precursor_mz
    matchms.filtering.add_retention
    matchms.filtering.clean_compound_name
    matchms.filtering.correct_charge
    matchms.filtering.default_filters
    matchms.filtering.derive_adduct_from_name
    matchms.filtering.derive_formula_from_name
    matchms.filtering.derive_inchi_from_smiles
    matchms.filtering.derive_inchikey_from_inchi
    matchms.filtering.derive_ionmode
    matchms.filtering.derive_smiles_from_inchi
    matchms.filtering.harmonize_undefined_inchi
    matchms.filtering.harmonize_undefined_inchikey
    matchms.filtering.harmonize_undefined_smiles
    matchms.filtering.interpret_pepmass
    matchms.filtering.load_adducts
    matchms.filtering.make_charge_int
    matchms.filtering.make_charge_scalar
    matchms.filtering.make_ionmode_lowercase
    matchms.filtering.normalize_intensities
    matchms.filtering.reduce_to_number_of_peaks
    matchms.filtering.remove_peaks_around_precursor_mz
    matchms.filtering.remove_peaks_outside_top_k
    matchms.filtering.repair_inchi_inchikey_smiles
    matchms.filtering.require_minimum_number_of_peaks
    matchms.filtering.require_minimum_of_high_peaks
    matchms.filtering.require_precursor_below_mz
    matchms.filtering.require_precursor_mz
    matchms.filtering.select_by_intensity
    matchms.filtering.select_by_mz
    matchms.filtering.select_by_relative_intensity
    matchms.filtering.set_ionmode_na_when_missing
    matchms.filtering.SpeciesString
    matchms.Fragments
    matchms.hashing
    matchms.importing
    matchms.importing.load_from_json
    matchms.importing.load_from_mgf
    matchms.importing.load_from_msp
    matchms.importing.load_from_mzml
    matchms.importing.load_from_mzxml
    matchms.importing.load_from_usi
    matchms.importing.parsing_utils
    matchms.logging_functions
    matchms.Metadata
    matchms.metadata_utils
    matchms.networking
    matchms.networking.networking_functions
    matchms.networking.SimilarityNetwork
    matchms.plotting
    matchms.plotting.spectrum_plots
    matchms.Scores
    matchms.similarity
    matchms.similarity.BaseSimilarity
    matchms.similarity.CosineGreedy
    matchms.similarity.CosineHungarian
    matchms.similarity.FingerprintSimilarity
    matchms.similarity.IntersectMz
    matchms.similarity.MetadataMatch
    matchms.similarity.ModifiedCosine
    matchms.similarity.NeutralLossesCosine
    matchms.similarity.ParentMassMatch
    matchms.similarity.PrecursorMzMatch
    matchms.similarity.spectrum_similarity_functions
    matchms.similarity.vector_similarity_functions
    matchms.Spectrum
    matchms.Spikes
    matchms.typing
    matchms.utils